Detailed information for motif33

P-value:1e-19
ln P-value:-4.491e+01
Information content per bp:1.715
Number of target sequences with motif:107.0
Percentage of target sequences with motif:4.07%
Number of background sequences with motif:677.4
Percentage of background sequences with motif:  1.46%
Average position of motif in targets:193.2 +/- 92.1bp
Average position of motif in background:206.4 +/- 122.1bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.02
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

RUNX1..3.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.82
Offset:2
Orientation:forward strand
Alignment:CGCTTGTGGTTA
--TTTGTGGTT-
  

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match rank:  2
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CGCTTGTGGTTA-
-NNHTGTGGTTWN
  

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer

Match rank:  3
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:CGCTTGTGGTTA
--NNTGTGGTTT
  

RUNX2_f1_HM09

Match rank:  4
Score:0.80
Offset:3
Orientation:forward strand
Alignment:CGCTTGTGGTTA--
---CTGTGGTTTGT
  

RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer

Match rank:  5
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:CGCTTGTGGTTA-
---CTGTGGTTTN