Detailed information for motif35

P-value:1e-16
ln P-value:-3.912e+01
Information content per bp:1.878
Number of target sequences with motif:2131.0
Percentage of target sequences with motif:30.58%
Number of background sequences with motif:11131.3
Percentage of background sequences with motif:  26.03%
Average position of motif in targets:200.4 +/- 113.6bp
Average position of motif in background:200.0 +/- 116.4bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.37
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match rank:  1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GCCCAGVC--
--CCAGACAG
  

SMAD3_f1_HM09

Match rank:  2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GCCCAGVC--
NGCCAGACAC
  

SMAD4_si_HM09

Match rank:  3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GCCCAGVC-
GGNCAGACA
  

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match rank:  4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GCCCAGVC----
--CCAGACRSVB
  

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match rank:  5
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GCCCAGVC--
--BCAGACWA