Detailed information for motif31

P-value:1e-25
ln P-value:-5.946e+01
Information content per bp:1.935
Number of target sequences with motif:1875.0
Percentage of target sequences with motif:26.90%
Number of background sequences with motif:9209.1
Percentage of background sequences with motif:  21.54%
Average position of motif in targets:199.6 +/- 106.4bp
Average position of motif in background:199.4 +/- 117.6bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.16
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MF0004.1_Nuclear_Receptor_class

Match rank:  1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TGACCAA
TGACCT-
  

ESR2_si_HM09

Match rank:  2
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-TGACCAA
GTGACCT-
  

RORA_f1_HM09

Match rank:  3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TGACCAA-----
TGACCTAGTTTT
  

MA0072.1_RORA_2

Match rank:  4
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TGACCAA------
TTGACCTANTTATN
  

RORA.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TGACCAA------
CTGACCTANTTTTN