Detailed information for motif28

P-value:1e-21
ln P-value:-5.011e+01
Information content per bp:1.730
Number of target sequences with motif:453.0
Percentage of target sequences with motif:15.04%
Number of background sequences with motif:4424.9
Percentage of background sequences with motif:  9.47%
Average position of motif in targets:201.9 +/- 98.0bp
Average position of motif in background:199.2 +/- 116.7bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.13
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq/Homer

Match rank:  1
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-GGGYGTGGC
TGGGTGTGGC
  

KLF4.p3.SwissRegulon.nucfreq

Match rank:  2
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-GGGYGTGGC
TGGGTGGGGC
  

MA0039.2_Klf4

Match rank:  3
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-GGGYGTGGC
TGGGTGGGGC
  

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match rank:  4
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--GGGYGTGGC-
NTGGGTGTGGCC
  

KLF4_f2_HM09

Match rank:  5
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-GGGYGTGGC
TGGGCGGGGC