Detailed information for motif27

P-value:1e-21
ln P-value:-5.028e+01
Information content per bp:1.588
Number of target sequences with motif:337.0
Percentage of target sequences with motif:11.19%
Number of background sequences with motif:3000.4
Percentage of background sequences with motif:  6.42%
Average position of motif in targets:200.1 +/- 102.9bp
Average position of motif in background:197.4 +/- 114.9bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.08
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

TFE3_f1_HM09

Match rank:  1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GTCATGTGGTAA
GGTCATGTGG---
  

MITF_f1_HM09

Match rank:  2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GTCATGTGGTAA
GTCATGTGAT--
  

Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match rank:  3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTCATGTGGTAA
GTCACGTGGT--
  

USF2_f1_HM09

Match rank:  4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTCATGTGGTAA
GTCACGTGGGC-
  

USF1_f1_HM09

Match rank:  5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GTCATGTGGTAA
GGTCACGTGG---