Detailed information for motif1

P-value:1e-30
ln P-value:-6.994e+01
Information content per bp:1.684
Number of target sequences with motif:67.0
Percentage of target sequences with motif:26.27%
Number of background sequences with motif:2278.1
Percentage of background sequences with motif:  4.69%
Average position of motif in targets:199.4 +/- 77.1bp
Average position of motif in background:199.8 +/- 114.8bp
Strand bias (log2 ratio + to - strand density):0.3
Multiplicity (# of sites on avg that occur together):  1.10
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

JUN_f1_HM09

Match rank:  1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:GTGACTCAK
NTGACTCAN
  

SMRC1_f1_HM09

Match rank:  2
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:GTGACTCAK
NTGACTCAN
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  3
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GTGACTCAK-
ATGACTCATC
  

JUND_f1_HM09

Match rank:  4
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-GTGACTCAK-
GATGACTCATC
  

FOSL2_f1_HM09

Match rank:  5
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:GTGACTCAK--
ATGACTCATCC