Detailed information for motif24

P-value:1e-15
ln P-value:-3.579e+01
Information content per bp:1.593
Number of target sequences with motif:82.0
Percentage of target sequences with motif:4.64%
Number of background sequences with motif:785.0
Percentage of background sequences with motif:  1.64%
Average position of motif in targets:183.5 +/- 109.9bp
Average position of motif in background:201.4 +/- 116.1bp
Strand bias (log2 ratio + to - strand density):0.2
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0132.1_Pdx1

Match rank:  1
Score:0.74
Offset:4
Orientation:forward strand
Alignment:TGAGCTAAT-
----CTAATT
  

MA0284.1_CIN5

Match rank:  2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TGAGCTAAT-
TTACGTAATC
  

PH0081.1_Pdx1

Match rank:  3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCTAAT------
NTGNGCTAATTACCNN
  

MA0094.1_Ubx

Match rank:  4
Score:0.71
Offset:5
Orientation:forward strand
Alignment:TGAGCTAAT
-----TAAT
  

HOX{A6,A7,B6,B7}.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.71
Offset:5
Orientation:forward strand
Alignment:TGAGCTAAT
-----TAAT