Detailed information for motif20

P-value:1e-16
ln P-value:-3.819e+01
Information content per bp:1.512
Number of target sequences with motif:324.0
Percentage of target sequences with motif:18.32%
Number of background sequences with motif:5498.5
Percentage of background sequences with motif:  11.47%
Average position of motif in targets:208.8 +/- 112.3bp
Average position of motif in background:203.3 +/- 116.0bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.05
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq/Homer

Match rank:  1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CACAGGVAGGA
AACAGGAAGT-
  

ETV5_f1_HM09

Match rank:  2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CACAGGVAGGA--
GACAGGAAGTAAC
  

ERG(ETS)/VCaP-ERG-ChIP-Seq/Homer

Match rank:  3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CACAGGVAGGA
-ACAGGAAGTG
  

MF0001.1_ETS_class

Match rank:  4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CACAGGVAGGA
-ACCGGAAG--
  

ELF1,2,4.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CACAGGVAGGA
--CCGGAAG--