Detailed information for motif18

P-value:1e-15
ln P-value:-3.535e+01
Information content per bp:1.701
Number of target sequences with motif:126.0
Percentage of target sequences with motif:10.97%
Number of background sequences with motif:2430.8
Percentage of background sequences with motif:  5.00%
Average position of motif in targets:218.5 +/- 101.5bp
Average position of motif in background:199.8 +/- 119.3bp
Strand bias (log2 ratio + to - strand density):-0.4
Multiplicity (# of sites on avg that occur together):  1.07
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

ISRE(IRF)/ThioMac-LPS-exp/HOMER

Match rank:  1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CTWNCTGTTTC
AGTTTCAGTTTC
  

IRF1_si_HM09

Match rank:  2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTWNCTGTTTC
ACTTTCACTTTC
  

IRF2_f1_HM09

Match rank:  3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTWNCTGTTTC-
NNCTTTCACTTTCC
  

MYBL2.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTWNCTGTTTC
-TAACTGTTT-
  

SPIB_f1_HM09

Match rank:  5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTWNCTGTTTC-
CTTCCTCTTTTT