Detailed information for motif3

P-value:1e-18
ln P-value:-4.175e+01
Information content per bp:1.672
Number of target sequences with motif:41.0
Percentage of target sequences with motif:9.49%
Number of background sequences with motif:807.2
Percentage of background sequences with motif:  1.65%
Average position of motif in targets:203.8 +/- 86.6bp
Average position of motif in background:196.7 +/- 119.2bp
Strand bias (log2 ratio + to - strand density):0.5
Multiplicity (# of sites on avg that occur together):  1.03
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MITF_f1_HM09

Match rank:  1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TTGGCATGTGAC
--GTCATGTGAT
  

MA0321.1_INO2

Match rank:  2
Score:0.77
Offset:3
Orientation:forward strand
Alignment:TTGGCATGTGAC
---GCATGTGAA
  

MA0322.1_INO4

Match rank:  3
Score:0.76
Offset:3
Orientation:forward strand
Alignment:TTGGCATGTGAC
---GCATGTGAA
  

SREBF1,2.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TTGGCATGTGAC-
--GTCACGTGACC
  

Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match rank:  5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TTGGCATGTGAC
--ACCACGTGAC