Detailed information for motif9

P-value:1e-15
ln P-value:-3.583e+01
Information content per bp:1.834
Number of target sequences with motif:210.0
Percentage of target sequences with motif:35.41%
Number of background sequences with motif:10143.8
Percentage of background sequences with motif:  20.90%
Average position of motif in targets:197.9 +/- 97.0bp
Average position of motif in background:193.9 +/- 117.5bp
Strand bias (log2 ratio + to - strand density):0.2
Multiplicity (# of sites on avg that occur together):  1.28
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0039.2_Klf4

Match rank:  1
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GGGTGGTGC
TGGGTGGGGC
  

KLF4.p3.SwissRegulon.nucfreq

Match rank:  2
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GGGTGGTGC
TGGGTGGGGC
  

KLF4_f2_HM09

Match rank:  3
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GGGTGGTGC
TGGGCGGGGC
  

KLF1_f1_HM09

Match rank:  4
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GGGTGGTGC
CAGGGTGTGGC
  

ZIC1_f1_HM09

Match rank:  5
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGGTGGTGC
GGGGTGGTC-