Detailed information for motif12

P-value:1e-15
ln P-value:-3.528e+01
Information content per bp:1.798
Number of target sequences with motif:275.0
Percentage of target sequences with motif:46.37%
Number of background sequences with motif:14826.0
Percentage of background sequences with motif:  30.55%
Average position of motif in targets:208.3 +/- 101.0bp
Average position of motif in background:197.8 +/- 119.8bp
Strand bias (log2 ratio + to - strand density):0.3
Multiplicity (# of sites on avg that occur together):  1.40
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0443.1_btd

Match rank:  1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:CMCKCCCT--
TCCGCCCCCT
  

KLF4_f2_HM09

Match rank:  2
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CMCKCCCT
GCCCCGCCCN
  

MA0039.2_Klf4

Match rank:  3
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CMCKCCCT
GCCCCACCCA
  

KLF4.p3.SwissRegulon.nucfreq

Match rank:  4
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CMCKCCCT
GCCCCACCCA
  

PB0039.1_Klf7_1

Match rank:  5
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----CMCKCCCT---
TCGACCCCGCCCCTAT