Detailed information for motif30

P-value:1e-18
ln P-value:-4.343e+01
Information content per bp:1.653
Number of target sequences with motif:355.0
Percentage of target sequences with motif:18.78%
Number of background sequences with motif:5556.3
Percentage of background sequences with motif:  11.64%
Average position of motif in targets:202.9 +/- 115.0bp
Average position of motif in background:200.6 +/- 118.9bp
Strand bias (log2 ratio + to - strand density):0.3
Multiplicity (# of sites on avg that occur together):  1.11
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

RUNX1..3.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:AACCACAAGC
AACCACAAA-
  

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer

Match rank:  2
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-AACCACAAGC
AAACCACANN-
  

RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer

Match rank:  3
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--AACCACAAGC
NAAACCACAG--
  

RUNX2_f1_HM09

Match rank:  4
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---AACCACAAGC
ACNAACCACAN--
  

MA0002.2_RUNX1

Match rank:  5
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AACCACAAGC
AAACCACAGAN