Detailed information for motif39

P-value:1e-17
ln P-value:-4.049e+01
Information content per bp:1.814
Number of target sequences with motif:273.0
Percentage of target sequences with motif:9.88%
Number of background sequences with motif:2670.6
Percentage of background sequences with motif:  5.69%
Average position of motif in targets:200.0 +/- 95.1bp
Average position of motif in background:195.0 +/- 116.0bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.13
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0443.1_btd

Match rank:  1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:CCCGCCCAS-
TCCGCCCCCT
  

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match rank:  2
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:CCCGCCCAS---
YCCGCCCACGCN
  

SP1.p2.SwissRegulon.nucfreq

Match rank:  3
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----CCCGCCCAS-
CGGCCCCGCCCCCC
  

EGR2_si_HM09

Match rank:  4
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CCCGCCCAS---
-CCGCCCACGCN
  

SP1_f1_HM09

Match rank:  5
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCCCAS
GCCCCGCCCCC