Detailed information for motif38

P-value:1e-17
ln P-value:-4.056e+01
Information content per bp:1.641
Number of target sequences with motif:854.0
Percentage of target sequences with motif:30.91%
Number of background sequences with motif:11120.9
Percentage of background sequences with motif:  23.68%
Average position of motif in targets:201.7 +/- 111.4bp
Average position of motif in background:199.6 +/- 117.7bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.15
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PB0120.1_Foxj1_2

Match rank:  1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----AGTTATGA---
GTNTTGTTGTGANNT
  

MA0217.1_caup

Match rank:  2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGTTATGA
TGTTA---
  

MA0210.1_ara

Match rank:  3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGTTATGA
TGTTA---
  

MA0233.1_mirr

Match rank:  4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGTTATGA
TGTTT---
  

MAFG_si_HM09

Match rank:  5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGTTATGA
AGTCATN-