Detailed information for motif28

P-value:1e-20
ln P-value:-4.700e+01
Information content per bp:1.610
Number of target sequences with motif:292.0
Percentage of target sequences with motif:10.57%
Number of background sequences with motif:2780.2
Percentage of background sequences with motif:  5.92%
Average position of motif in targets:197.2 +/- 98.4bp
Average position of motif in background:198.8 +/- 113.1bp
Strand bias (log2 ratio + to - strand density):0.2
Multiplicity (# of sites on avg that occur together):  1.09
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MITF_f1_HM09

Match rank:  1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TGGTCACATGAT
--NTCACATGAC
  

PL0005.1_hlh-30

Match rank:  2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TGGTCACATGAT---
NNNNGTCACGTGATNNN
  

USF1_f1_HM09

Match rank:  3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TGGTCACATGAT
-GGTCACGTGG-
  

Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match rank:  4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGGTCACATGAT
--GTCACGTGGT
  

TFEB.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGGTCACATGAT
--GTCACGTGAC