Detailed information for motif8

P-value:1e-71
ln P-value:-1.647e+02
Information content per bp:1.651
Number of target sequences with motif:242.0
Percentage of target sequences with motif:6.30%
Number of background sequences with motif:701.2
Percentage of background sequences with motif:  1.55%
Average position of motif in targets:205.1 +/- 70.5bp
Average position of motif in background:211.7 +/- 120.9bp
Strand bias (log2 ratio + to - strand density):0.2
Multiplicity (# of sites on avg that occur together):  1.05
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

RFX3_f1_HM09

Match rank:  1
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:GTYWCCATGGCAAC-
-TTACCATGGCAACN
  

RFX1..5_RFXANK_RFXAP.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--GTYWCCATGGCAAC--
CNGTCGCCATGGCAACNG
  

Rfx1(HTH)/NPC-Rfx1-ChIP-Seq/Homer

Match rank:  3
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:GTYWCCATGGCAAC-
-TTGCCATGGCAACN
  

X-box(HTH)/NPC-H3K4me1-ChIP-Seq/Homer

Match rank:  4
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:GTYWCCATGGCAAC-
-TTGCCATGGCAACC
  

RFX(HTH)/K562-RFX3-ChIP-Seq/Homer

Match rank:  5
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GTYWCCATGGCAAC--
GTTGCCATGGCAACCG