Detailed information for motif35

P-value:1e-18
ln P-value:-4.307e+01
Information content per bp:1.779
Number of target sequences with motif:558.0
Percentage of target sequences with motif:14.52%
Number of background sequences with motif:4494.2
Percentage of background sequences with motif:  9.94%
Average position of motif in targets:198.2 +/- 110.2bp
Average position of motif in background:205.7 +/- 125.0bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.07
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PH0158.1_Rhox11_2

Match rank:  1
Score:0.84
Offset:-4
Orientation:reverse strand
Alignment:----TTAACAGC-----
TCNCTTTACAGCGNNNT
  

PH0157.1_Rhox11_1

Match rank:  2
Score:0.84
Offset:-4
Orientation:reverse strand
Alignment:----TTAACAGC-----
TCNNTTTACAGCGNNNT
  

Eomes(T-box)/H9-Eomes-ChIP-Seq/Homer

Match rank:  3
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TTAACAGC-
NTTAACACCT
  

PB0109.1_Bbx_2

Match rank:  4
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------TTAACAGC---
TGATTGTTAACAGTTGG
  

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match rank:  5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTAACAGC--
NHAACBGYYV