Detailed information for motif28

P-value:1e-21
ln P-value:-4.991e+01
Information content per bp:1.769
Number of target sequences with motif:2550.0
Percentage of target sequences with motif:66.35%
Number of background sequences with motif:26576.1
Percentage of background sequences with motif:  58.75%
Average position of motif in targets:199.6 +/- 112.8bp
Average position of motif in background:200.3 +/- 122.1bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.58
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0020.1_Dof2

Match rank:  1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTCT
NGCTTT--
  

MA0053.1_MNB1A

Match rank:  2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GCTTTCT
GCTTT--
  

MA0064.1_PBF

Match rank:  3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GCTTTCT
GCTTT--
  

MA0021.1_Dof3

Match rank:  4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTCT
CGCTTT--
  

MA0305.1_GCR2

Match rank:  5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCTTTCT
GCTTCCT