Detailed information for motif25

P-value:1e-23
ln P-value:-5.474e+01
Information content per bp:1.639
Number of target sequences with motif:2625.0
Percentage of target sequences with motif:68.31%
Number of background sequences with motif:27320.9
Percentage of background sequences with motif:  60.40%
Average position of motif in targets:197.3 +/- 108.7bp
Average position of motif in background:199.2 +/- 124.5bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.54
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PB0166.1_Sox12_2

Match rank:  1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CACACACAAAGAAA-
AAACAGACAAAGGAAT
  

PB0130.1_Gm397_2

Match rank:  2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CACACACAAAGAAA
AGCGGCACACACGCAA---
  

FOXJ3_f2_HM09

Match rank:  3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CACACACAAAGAAA-
--TAAACAAAAACAA
  

FOX{I1,J2}.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CACACACAAAGAAA-
---AAATAAACANNC
  

MA0082.1_squamosa

Match rank:  5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CACACACAAAGAAA-
-CCAAAAATGGAAAT