Detailed information for motif2

P-value:1e-27
ln P-value:-6.253e+01
Information content per bp:1.720
Number of target sequences with motif:83.0
Percentage of target sequences with motif:19.17%
Number of background sequences with motif:2248.1
Percentage of background sequences with motif:  4.65%
Average position of motif in targets:179.8 +/- 120.4bp
Average position of motif in background:205.9 +/- 115.7bp
Strand bias (log2 ratio + to - strand density):0.5
Multiplicity (# of sites on avg that occur together):  1.03
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

JUNB_f1_HM09

Match rank:  1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:STGACTAAG-
NTGACTCANN
  

SMRC1_f1_HM09

Match rank:  2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:STGACTAAG
NTGACTCAN
  

JUN_f1_HM09

Match rank:  3
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:STGACTAAG
NTGACTCAN
  

FOSL2.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.78
Offset:1
Orientation:forward strand
Alignment:STGACTAAG----
-TGACTCANNGTN
  

BATF_si_HM09

Match rank:  5
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-STGACTAAG
NATGACTCAT