Detailed information for motif1

P-value:1e-47
ln P-value:-1.103e+02
Information content per bp:1.605
Number of target sequences with motif:110.0
Percentage of target sequences with motif:25.40%
Number of background sequences with motif:2251.3
Percentage of background sequences with motif:  4.66%
Average position of motif in targets:207.3 +/- 71.4bp
Average position of motif in background:199.7 +/- 113.9bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.18
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer

Match rank:  1
Score:0.98
Offset:4
Orientation:reverse strand
Alignment:HDGBNVTGAVTCAT
----DVTGASTCAB
  

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer

Match rank:  2
Score:0.97
Offset:4
Orientation:forward strand
Alignment:HDGBNVTGAVTCAT--
----NATGACTCATNN
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  3
Score:0.96
Offset:5
Orientation:forward strand
Alignment:HDGBNVTGAVTCAT-
-----ATGACTCATC
  

MA0099.1_Fos

Match rank:  4
Score:0.94
Offset:5
Orientation:forward strand
Alignment:HDGBNVTGAVTCAT
-----GTGAGTCA-
  

MA0303.1_GCN4

Match rank:  5
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-HDGBNVTGAVTCAT------
CAAGGGATGAGTCATACTTCA