Detailed information for motif7

P-value:1e-15
ln P-value:-3.599e+01
Information content per bp:1.649
Number of target sequences with motif:165.0
Percentage of target sequences with motif:32.04%
Number of background sequences with motif:8410.9
Percentage of background sequences with motif:  17.24%
Average position of motif in targets:200.2 +/- 110.6bp
Average position of motif in background:197.2 +/- 119.5bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.17
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

NFkB-p65-Rel(RHD)/LPS-exp/Homer

Match rank:  1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:GGCAAATTCC-
-GGAAATTCCC
  

TF65_f2_HM09

Match rank:  2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GGCAAATTCC-
GGGAAATTCCC
  

NFAC1_do_HM09

Match rank:  3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GGCAAATTCC--
TGGAAATTTCCAT
  

MA0107.1_RELA

Match rank:  4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GGCAAATTCC-
-GGAAATTCCC
  

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq/Homer

Match rank:  5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GGCAAATTCC--
GGGAAATCCCCN