Detailed information for motif5

P-value:1e-17
ln P-value:-3.983e+01
Information content per bp:1.675
Number of target sequences with motif:100.0
Percentage of target sequences with motif:19.34%
Number of background sequences with motif:3698.8
Percentage of background sequences with motif:  7.56%
Average position of motif in targets:201.5 +/- 101.7bp
Average position of motif in background:198.3 +/- 114.1bp
Strand bias (log2 ratio + to - strand density):0.3
Multiplicity (# of sites on avg that occur together):  1.12
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PB0060.1_Smad3_1

Match rank:  1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TTCCTGTCTGG-----
NNTNNTGTCTGGNNTNG
  

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match rank:  2
Score:0.76
Offset:3
Orientation:forward strand
Alignment:TTCCTGTCTGG
---CTGTCTGG
  

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq/Homer

Match rank:  3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TTCCTGTCTGG
ATTTCCTGTN---
  

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq/Homer

Match rank:  4
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TTCCTGTCTGG
ACTTCCTGTT---
  

ERG(ETS)/VCaP-ERG-ChIP-Seq/Homer

Match rank:  5
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TTCCTGTCTGG
CACTTCCTGT----