Detailed information for motif2

P-value:1e-35
ln P-value:-8.266e+01
Information content per bp:1.666
Number of target sequences with motif:59.0
Percentage of target sequences with motif:11.41%
Number of background sequences with motif:622.7
Percentage of background sequences with motif:  1.27%
Average position of motif in targets:202.0 +/- 74.3bp
Average position of motif in background:200.3 +/- 117.5bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.03
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

CREB1_f1_HM09

Match rank:  1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TDCGTCACTS
TGACGTCAC--
  

CREB1.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TDCGTCACTS--
NACGTCACCNNG
  

ATF3_f1_HM09

Match rank:  3
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TDCGTCACTS
TGGCGTCAC--
  

PAX2.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.79
Offset:2
Orientation:forward strand
Alignment:TDCGTCACTS
--NGTCACGN
  

MA0129.1_TGA1A

Match rank:  5
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TDCGTCACTS
TACGTCA---