Detailed information for motif28

P-value:1e-58
ln P-value:-1.355e+02
Information content per bp:1.726
Number of target sequences with motif:5235.0
Percentage of target sequences with motif:27.09%
Number of background sequences with motif:6471.2
Percentage of background sequences with motif:  22.12%
Average position of motif in targets:314.0 +/- 244.8bp
Average position of motif in background:272.3 +/- 200.9bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.16
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0295.1_FHL1

Match rank:  1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-WCGCTAGG
GACGCAAA-
  

MA0396.1_STP3

Match rank:  2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-WCGCTAGG
TGCGCTAGC
  

AHR_si_HM09

Match rank:  3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--WCGCTAGG
GCACGCAAN-
  

MA0006.1_Arnt::Ahr

Match rank:  4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-WCGCTAGG
CACGCA---
  

PL0008.1_hlh-29

Match rank:  5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----WCGCTAGG----
CTGCCACGCGTGGCCAA